Update to plotSeuratGenes#790
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joshua-d-campbell merged 5 commits intocompbiomed:develfrom Aug 23, 2025
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Allows the use of dotplot and heatmap with only 1 gene by adding a dummy feature to the ScaleData() call
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@salzcamino, this is great! Could you just grep the whole repo for "plotSCEDimReduceFeatures" in the rest of the toolkit (especially in the pkgdown articles and shiny server.R file)? Since the parameter "feature" was changes to "features", there are probably a few other places where that is used. The safest way to change parameters and have backwards compatibility is to keep a "depreciated" parameter called "feature" in the function (in addition to the new parameter) and just say it is the same as the "features" parameter in the description. |
…' and adds deprecated tag to 'feature' argument
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@joshua-d-campbell thanks for the comments! I think fixed all the references to the function now, and I added the deprecated parameter. Let me know if you see anything else that needs addressing |
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Minor update, uses a dummy gene in the ScaleData() call to fix the error caused by attempting to plot only 1 gene with the dotplot and heatmap